afni  most recent diff

View the most recent changes for the afni port at: afni.darwinports.com/diff
Scroll down toward the bottom of the page to get installation instructions for afni.
The raw portfile for afni 2007.04.18.1830 is located here:
http://afni.darwinports.com/dports/science/afni/Portfile
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Check for any related Fink projects here: pdb.finkproject.org/pdb/package.php/afni

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# $Id: Portfile 27682 2007-08-12 01:48:12Z nox macports.org $
PortSystem 1.0
Name: afni
Version: 2007.04.18.1830
distfiles afni_src.tgz afni.1 TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3c-May0806.tgz openMotif-2.2.3.tar.gz
Category: science
Maintainers: bacon smithers.neuro.mcw.edu
Description: Analysis of Functional Neuro Images
Long Description: This is a port of AFNI, Advanced Functional Neuro Imaging. AFNI is a tool for analyzing 3 dimensional images, especially functional MRI images used in brain mapping research.
Homepage: http://afni.nimh.nih.gov/
master_sites http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${version}/
checksums afni_src.tgz md5 90ecae8727cadc6172517bc7149be67e afni.1 md5 80cc1f1c6ca0ef59a3032ad63abfbdd5 TTatlas+tlrc.BRIK.gz md5 f5a107b049bc426af5342565f4e5beee TTatlas+tlrc.HEAD md5 a0ca787a2996d7e66548176808503ac5 CA_EZ_v1.3c-May0806.tgz md5 dbb2caab5c030c505b306e1526d19150 openMotif-2.2.3.tar.gz md5 94c96a0f94ee0d5e41d3dba2188b263d
extract.only afni_src.tgz CA_EZ_v1.3c-May0806.tgz openMotif-2.2.3.tar.gz
use_configure no
depends_lib port:glib2
depends_run port:netpbm port:jpeg port:whirlgif port:endian
build.dir ${workpath}/afni_src
build.target vastness

platform powerpc {
post-patch {
cd ${workpath}/afni_src
file copy ${filespath}/Makefile.ppc Makefile
reinplace "s|openMotif-2.2.3|${workpath}/openMotif-2.2.3|g" ${workpath}/afni_src/Makefile
}
}

platform i386 {
post-patch {
cd ${workpath}/afni_src
file copy ${filespath}/Makefile.i386 Makefile
reinplace "s|openMotif-2.2.3|${workpath}/openMotif-2.2.3|g" ${workpath}/afni_src/Makefile
}
}

pre-build {
cd ${workpath}/openMotif-2.2.3
system "./configure --disable-shared --enable-static --disable-demos"
system "make"
}

destroot {
# First, separate files that were all dumped into macosx_bin by the Makefile
cd ${workpath}/afni_src
file mkdir macosx_lib
eval file rename [glob macosx_bin/*.a] macosx_lib
eval file rename [glob macosx_bin/*.so] macosx_lib
file mkdir macosx_include
eval file rename [glob macosx_bin/*.h] macosx_include
file mkdir macosx_share
eval file rename [glob macosx_bin/*.jpg] macosx_share
eval file rename [glob macosx_bin/*.txt] macosx_share

# Delete files that conflict with other ports
eval file delete macosx_bin/cjpeg macosx_bin/djpeg macosx_bin/whirlgif

# Install binaries and scripts
xinstall -d -m 755 ${destroot}${prefix}/bin
eval xinstall -m 755 [glob macosx_bin/*] ${destroot}${prefix}/bin
# Install libraries and plugins
xinstall -d -m 755 ${destroot}${prefix}/lib/afni
eval xinstall -m 644 [glob macosx_lib/*] ${destroot}${prefix}/lib/afni
# Install headers
xinstall -d -m 755 ${destroot}${prefix}/include/afni
eval xinstall -m 644 [glob macosx_include/*] ${destroot}${prefix}/include/afni

# Install miscellaneous files
xinstall -d -m 755 ${destroot}${prefix}/share/afni
eval xinstall -m 644 [glob macosx_share/*] ${destroot}${prefix}/share/afni
eval xinstall -m 644 [glob ${distpath}/TTatlas*] ${destroot}${prefix}/share/afni
cd ${workpath}
eval xinstall -m 644 [glob CA_EZ_v1.3c-May0806/*] ${destroot}${prefix}/share/afni

# Install docs
xinstall -d -m 755 ${destroot}${prefix}/share/doc/afni
eval xinstall -m 644 [glob afni_src/README.*] ${destroot}${prefix}/share/doc/afni
xinstall -d -m 755 ${destroot}${prefix}/man/man1
eval xinstall -m 644 ${distpath}/afni.1 ${destroot}${prefix}/man/man1
reinplace "s|%%PREFIX%%|${prefix}|g" ${destroot}${prefix}/man/man1/afni.1
}

If you haven't already installed Darwin Ports, you can find easy instructions for doing so at the main Darwin Ports page.
Once Darwin Ports has been installed, in a terminal window and while online, type the following and hit return:

%  cd /opt/local/bin/portslocation/dports/afni
%  sudo port install afni  
Password: 

You will then be prompted for your root password, which you should enter. You may have to wait for a few minutes while the software is retrieved from the network and installed for you. Y ou should see something that looks similar to:

--->  Fetching afni
--->  Verifying checksum for afni
--->  Extracting afni
--->  Configuring afni
--->  Building afni with target all

--->  Staging afni into destroot

--->  Installing afni

- Make sure that you do not close the terminal window while Darwin Ports is working. Once the software has been installed, you can find further information about using afni with these commands:

%  man afni
%  apropos afni
%  which afni
%  locate afni

 Where to find more information: